X-Window-based Microscopy Image Processing Package
Xmipp is a suite of image processing programs, primarily aimed at single-particle 3D electron microscopy. If you have used Xmipp in your work, please cite our papers as given in the List Of References.

Getting started

Quick introduction to Xmipp. Good starting point to try out the new version. You will know the first steps to create a project and an overview of the whole workflow


Follow the more educationally oriented introductory courses. You can complete processing tasks with different datasets and find short video tutorials.

How to Install

See instructions on how to install Xmipp on your machine, with description of dependencies and a list of tested platforms.

Xmipp 3.0 world tour

Check out the next workshop in the complete Xmipp 3.0 workshop tour

List of programs

Complete reference to all programs describing parameters, behaviour and output.

Developing Xmipp

Documentation and resources for development. Learn how to use Xmipp from Python and Java.


Interactomic data for quaternary structure modelling

Check out the Information Integration in Structural Biology section