Xmipp

Xmipp Workshop; Paris, 7 - November - 2013 (Registration Open)

  • Location: Université Pierre et Marie Curie, 4 Place Jussieu, 75005 Paris. Tower 22-23
    • Oral presentations: Salle de conférence de l'IMPMC, 4e étage, Salle 4.0.1
    • Hands-on: Salle informatique de la faculté de physique, 1er étage, Salle 1.1.1
  • Dates: November 7st and 8st. See program below.

Outline of the workshop

The Workshop covers the details of the Xmipp software package, that is used for reconstructing 3D maps from sets of individual particle images. The majority of the workshop consists of hands-on sessions designed to familiarize the attendees with the public-domain Xmipp software.

Signing up

Registration dealine: 31 Oct 2013

Attendance is free of charge but advance registration is required as space is limited. Please fill in this form.

Requirements

The exercises will be completely done on the machines in the computer room with preinstalled software.

Participants

A participant list will appear here a week before the event

Name Institute Area of Interest
Patrick Bron IBS Montpellier  
Daniel Levy Institute Curie  
Aurelie Bertin Institute Curie  
Pierre Damien Coureux Ecole Polytechnique  
Emmanuel Giudice Univ. Remmes 1  
Aurelie Nicolas Univ. Remmes 1  
Denis Chretien Univ. Remmes 1  
Stephanie Finet IMPMC Paris  
Ana Arteni CEA Saclay  
Jacques Lemains IMPMC  
Adeline Goulet AFMB Marseille  
Silvia Spinelli AFMB Marseille  
Ludovic Bannwarth IMPMC  
Zhuolun Li IMPMC  
Anastasia Gazi CNRS Gif-sur-Yvette  
Catherine Venien Bryan IMPMC  

Program

Thursday 7 November

11h50-12h00 Introduction (S. Jonic)

12h00-12h20 INSTRUCT Image Processing Center (I2PC) (C.O.S Sorzano)

12h20-12h30 Questions

12h30-12h50 Xmipp 3 architecture and main features (C.O.S Sorzano)

12h50-13h00 Questions

13h00-13h30 Image analysis using normal modes available in Xmipp 3 for analysing macromolecular flexibility (S. Jonic)

13h30-13h40 Questions

13h40-14h00 Break

14h00-17h30 Hands-on (C.O.S Sorzano/S. Jonic)

Friday 8 November

08h30-13h30 Hands-on (C.O.S Sorzano/S. Jonic)